Carnation DB

Dca25833.1

Annotation

9-exons
f-1
sp|B9IA31_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_246170#unknown#0F0P0C
Os04t0402300-00 Similar to Cysteine-type peptidase.
Repeat List (scaffold2566)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25833.1	19	221	221	73.3	203	80	2e-95
Target_name	Start	End	Length	Cov(%)
sp\|B9IA31_POPTR	16	219	219	93.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25833.1	19	221	221	68.77	203	75	7e-93
Target_name	Start	End	Length	Cov(%)
Os04t0402300-00	24	227	229	89.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2566	Augus-PASA	mRNA	17957	20918	.	-	.	ID=Dca25833.1;Parent=Dca25833
scaffold2566	Augus-PASA	exon	17957	18000	.	-	.	ID=Dca25833.1.exon1;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	18094	18150	.	-	.	ID=Dca25833.1.exon2;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	18356	18440	.	-	.	ID=Dca25833.1.exon3;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	19242	19290	.	-	.	ID=Dca25833.1.exon4;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	19388	19461	.	-	.	ID=Dca25833.1.exon5;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	19665	19739	.	-	.	ID=Dca25833.1.exon6;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	19814	19868	.	-	.	ID=Dca25833.1.exon7;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	20183	20256	.	-	.	ID=Dca25833.1.exon8;Parent=Dca25833.1
scaffold2566	Augus-PASA	exon	20766	20918	.	-	.	ID=Dca25833.1.exon9;Parent=Dca25833.1