Carnation DB

Dca25846.1

Annotation

7-exons
f-1
sp|A9PJS9_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#unknown#0F0P0C
AT5G57230.1 | Symbols: | Thioredoxin superfamily protein | chr5:23190572-23191485 FORWARD LENGTH=160
Repeat List (scaffold2568)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25846.1	73	229	233	53.64	157	80	3e-73
Target_name	Start	End	Length	Cov(%)
sp\|A9PJS9_9ROSI	1	157	161	97.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25846.1	73	230	233	48.92	158	73	7e-71
Target_name	Start	End	Length	Cov(%)
AT5G57230.1	1	158	160	98.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2568	Augus-PASA	mRNA	25582	30484	.	-	.	ID=Dca25846.1;Parent=Dca25846
scaffold2568	Augus-PASA	exon	25582	25662	.	-	.	ID=Dca25846.1.exon1;Parent=Dca25846.1
scaffold2568	Augus-PASA	exon	28836	28898	.	-	.	ID=Dca25846.1.exon2;Parent=Dca25846.1
scaffold2568	Augus-PASA	exon	29058	29144	.	-	.	ID=Dca25846.1.exon3;Parent=Dca25846.1
scaffold2568	Augus-PASA	exon	29447	29525	.	-	.	ID=Dca25846.1.exon4;Parent=Dca25846.1
scaffold2568	Augus-PASA	exon	29865	29984	.	-	.	ID=Dca25846.1.exon5;Parent=Dca25846.1
scaffold2568	Augus-PASA	exon	30087	30183	.	-	.	ID=Dca25846.1.exon6;Parent=Dca25846.1
scaffold2568	Augustus	exon	30310	30484	.	-	.	ID=Dca25846.1.exon7;Parent=Dca25846.1