Dca25871.1
Annotation
- 2-exons
- f-1
- sp|B9N7S5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_811745#GO:0008270#1F0P0C
- AT3G14740.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:4952185-4953306 REVERSE LENGTH=343
- Repeat List (scaffold257)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25871.1 |
1 |
80 |
414 |
9.42 |
80 |
42 |
9e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7S5_POPTR |
1 |
94 |
329 |
28.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25871.1 |
95 |
414 |
414 |
39.13 |
320 |
50 |
1e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14740.2 |
40 |
341 |
343 |
88.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold257 |
Augustus |
mRNA |
180420 |
181806 |
. |
+ |
. |
ID=Dca25871.1;Parent=Dca25871 |
| scaffold257 |
Augustus |
exon |
180420 |
181616 |
. |
+ |
. |
ID=Dca25871.1.exon1;Parent=Dca25871.1 |
| scaffold257 |
Augustus |
exon |
181759 |
181806 |
. |
+ |
. |
ID=Dca25871.1.exon2;Parent=Dca25871.1 |
