Dca25889.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold25721)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25889.1 |
1 |
235 |
248 |
60.48 |
235 |
52 |
2e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
215 |
507 |
964 |
30.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25889.1 |
4 |
132 |
248 |
20.96 |
129 |
40 |
8e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
615 |
746 |
1401 |
9.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold25721 |
Augustus |
mRNA |
5404 |
6315 |
. |
- |
. |
ID=Dca25889.1;Parent=Dca25889 |
| scaffold25721 |
Augustus |
exon |
5404 |
5739 |
. |
- |
. |
ID=Dca25889.1.exon1;Parent=Dca25889.1 |
| scaffold25721 |
Augustus |
exon |
5905 |
6315 |
. |
- |
. |
ID=Dca25889.1.exon2;Parent=Dca25889.1 |
