Carnation DB

Dca25928.1

Annotation

11-exons
f-1
sp|D7T1C6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g02320#GO:0050515;GO:0005524;GO:0016114#2F1P0C
sp|A9ZN11_HEVBR#4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase#Hevea brasiliensis (Para rubber tree) (Siphonia brasiliensis)#Name=HbCMK#GO:0050515;GO:0005524;GO:0016114#2F1P0C
Repeat List (scaffold2578)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25928.1	14	388	406	68.47	375	75	1e-163
Target_name	Start	End	Length	Cov(%)
sp\|D7T1C6_VITVI	15	382	394	93.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25928.1	28	392	406	61.08	365	68	9e-152
Target_name	Start	End	Length	Cov(%)
Os01t0802100-01	27	388	402	90.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2578	Augustus	mRNA	29414	33231	.	-	.	ID=Dca25928.1;Parent=Dca25928
scaffold2578	Augustus	exon	29414	29524	.	-	.	ID=Dca25928.1.exon1;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	29719	29804	.	-	.	ID=Dca25928.1.exon2;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	30020	30119	.	-	.	ID=Dca25928.1.exon3;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	30353	30452	.	-	.	ID=Dca25928.1.exon4;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	30544	30636	.	-	.	ID=Dca25928.1.exon5;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	31429	31629	.	-	.	ID=Dca25928.1.exon6;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	31724	31780	.	-	.	ID=Dca25928.1.exon7;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	32000	32104	.	-	.	ID=Dca25928.1.exon8;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	32342	32410	.	-	.	ID=Dca25928.1.exon9;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	32844	32939	.	-	.	ID=Dca25928.1.exon10;Parent=Dca25928.1
scaffold2578	Augus-PASA	exon	33031	33231	.	-	.	ID=Dca25928.1.exon11;Parent=Dca25928.1