Carnation DB

Dca25976.1

Annotation

5-exons
f-1
sp|A5AEN5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_011340#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold2584)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25976.1	1	259	473	31.5	259	52	3e-79
Target_name	Start	End	Length	Cov(%)
sp\|A5AEN5_VITVI	1027	1314	1316	21.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25976.1	1	244	473	17.54	244	31	4e-30
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	1109	1380	1401	19.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2584	Augustus	mRNA	5295	11797	.	+	.	ID=Dca25976.1;Parent=Dca25976
scaffold2584	Augustus	exon	5295	5686	.	+	.	ID=Dca25976.1.exon1;Parent=Dca25976.1
scaffold2584	Augustus	exon	5770	6151	.	+	.	ID=Dca25976.1.exon2;Parent=Dca25976.1
scaffold2584	Augustus	exon	6273	6395	.	+	.	ID=Dca25976.1.exon3;Parent=Dca25976.1
scaffold2584	Augustus	exon	10082	10160	.	+	.	ID=Dca25976.1.exon4;Parent=Dca25976.1
scaffold2584	Augustus	exon	11352	11797	.	+	.	ID=Dca25976.1.exon5;Parent=Dca25976.1