Dca26521.1
Annotation
- 2-exons
- f-1
- sp|Q10LB8_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g23780#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2632)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26521.1 |
1 |
341 |
341 |
70.38 |
341 |
69 |
6e-141
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10LB8_ORYSJ |
451 |
801 |
1305 |
26.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26521.1 |
149 |
319 |
341 |
18.18 |
171 |
37 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
827 |
996 |
1539 |
11.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2632 |
Augustus |
mRNA |
17065 |
18270 |
. |
- |
. |
ID=Dca26521.1;Parent=Dca26521 |
| scaffold2632 |
Augustus |
exon |
17065 |
17631 |
. |
- |
. |
ID=Dca26521.1.exon1;Parent=Dca26521.1 |
| scaffold2632 |
Augustus |
exon |
17812 |
18270 |
. |
- |
. |
ID=Dca26521.1.exon2;Parent=Dca26521.1 |
