Dca26574.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold264)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26574.1 |
40 |
197 |
198 |
29.79 |
158 |
36 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
520 |
686 |
1449 |
11.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26574.1 |
46 |
197 |
198 |
28.78 |
152 |
36 |
2e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G40390.1 |
96 |
254 |
426 |
37.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold264 |
Augustus |
mRNA |
81699 |
82488 |
. |
+ |
. |
ID=Dca26574.1;Parent=Dca26574 |
| scaffold264 |
Augustus |
exon |
81699 |
81792 |
. |
+ |
. |
ID=Dca26574.1.exon1;Parent=Dca26574.1 |
| scaffold264 |
Augustus |
exon |
81986 |
82488 |
. |
+ |
. |
ID=Dca26574.1.exon2;Parent=Dca26574.1 |
