Carnation DB

Dca26729.1

Annotation

8-exons
f-1
sp|B9IKG3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825668#GO:0004176;GO:0006508#1F1P0C
AT2G25740.1 | Symbols: | ATP-dependent protease La (LON) domain protein | chr2:10980175-10983632 FORWARD LENGTH=547
Repeat List (scaffold2656)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26729.1	1	297	301	50.49	297	50	3e-67
Target_name	Start	End	Length	Cov(%)
sp\|B9IKG3_POPTR	1	292	542	53.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26729.1	3	274	301	40.86	272	43	2e-50
Target_name	Start	End	Length	Cov(%)
AT2G25740.1	2	275	547	50.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2656	Augustus	mRNA	9268	13105	.	-	.	ID=Dca26729.1;Parent=Dca26729
scaffold2656	Augustus	exon	9268	9576	.	-	.	ID=Dca26729.1.exon1;Parent=Dca26729.1
scaffold2656	Augustus	exon	9682	9783	.	-	.	ID=Dca26729.1.exon2;Parent=Dca26729.1
scaffold2656	Augustus	exon	10249	10314	.	-	.	ID=Dca26729.1.exon3;Parent=Dca26729.1
scaffold2656	Augustus	exon	10397	10508	.	-	.	ID=Dca26729.1.exon4;Parent=Dca26729.1
scaffold2656	Augustus	exon	10634	10645	.	-	.	ID=Dca26729.1.exon5;Parent=Dca26729.1
scaffold2656	Augustus	exon	11463	11559	.	-	.	ID=Dca26729.1.exon6;Parent=Dca26729.1
scaffold2656	Augustus	exon	11644	11717	.	-	.	ID=Dca26729.1.exon7;Parent=Dca26729.1
scaffold2656	Augustus	exon	12972	13105	.	-	.	ID=Dca26729.1.exon8;Parent=Dca26729.1