Carnation DB

Dca2696.1

Annotation

21-exons
f-1
sp|E0CVB7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01030#unknown#0F0P0C
AT3G49400.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:18319249-18324373 REVERSE LENGTH=892
Repeat List (scaffold1095)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2696.1	10	171	997	9.72	162	60	8e-51
Target_name	Start	End	Length	Cov(%)
sp\|E0CVB7_VITVI	3	164	800	20.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2696.1	10	211	997	9.22	202	46	3e-45
Target_name	Start	End	Length	Cov(%)
AT3G49400.1	3	195	892	21.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1095	Augustus	mRNA	3744	11732	.	-	.	ID=Dca2696.1;Parent=Dca2696
scaffold1095	Augustus	exon	3744	3816	.	-	.	ID=Dca2696.1.exon1;Parent=Dca2696.1
scaffold1095	Augustus	exon	4304	4435	.	-	.	ID=Dca2696.1.exon2;Parent=Dca2696.1
scaffold1095	Augustus	exon	4852	5538	.	-	.	ID=Dca2696.1.exon3;Parent=Dca2696.1
scaffold1095	Augustus	exon	5793	5839	.	-	.	ID=Dca2696.1.exon4;Parent=Dca2696.1
scaffold1095	Augustus	exon	5982	6047	.	-	.	ID=Dca2696.1.exon5;Parent=Dca2696.1
scaffold1095	Augustus	exon	6175	6267	.	-	.	ID=Dca2696.1.exon6;Parent=Dca2696.1
scaffold1095	Augustus	exon	6530	6583	.	-	.	ID=Dca2696.1.exon7;Parent=Dca2696.1
scaffold1095	Augustus	exon	6669	6845	.	-	.	ID=Dca2696.1.exon8;Parent=Dca2696.1
scaffold1095	Augustus	exon	6938	7019	.	-	.	ID=Dca2696.1.exon9;Parent=Dca2696.1
scaffold1095	Augustus	exon	7095	7516	.	-	.	ID=Dca2696.1.exon10;Parent=Dca2696.1
scaffold1095	Augustus	exon	8305	8399	.	-	.	ID=Dca2696.1.exon11;Parent=Dca2696.1
scaffold1095	Augustus	exon	8660	8718	.	-	.	ID=Dca2696.1.exon12;Parent=Dca2696.1
scaffold1095	Augustus	exon	8857	9058	.	-	.	ID=Dca2696.1.exon13;Parent=Dca2696.1
scaffold1095	Augustus	exon	9160	9262	.	-	.	ID=Dca2696.1.exon14;Parent=Dca2696.1
scaffold1095	Augustus	exon	9343	9518	.	-	.	ID=Dca2696.1.exon15;Parent=Dca2696.1
scaffold1095	Augustus	exon	9754	9781	.	-	.	ID=Dca2696.1.exon16;Parent=Dca2696.1
scaffold1095	Augustus	exon	9888	9974	.	-	.	ID=Dca2696.1.exon17;Parent=Dca2696.1
scaffold1095	Augustus	exon	10300	10384	.	-	.	ID=Dca2696.1.exon18;Parent=Dca2696.1
scaffold1095	Augustus	exon	10496	10598	.	-	.	ID=Dca2696.1.exon19;Parent=Dca2696.1
scaffold1095	Augustus	exon	11388	11472	.	-	.	ID=Dca2696.1.exon20;Parent=Dca2696.1
scaffold1095	Augus-PASA	exon	11595	11732	.	-	.	ID=Dca2696.1.exon21;Parent=Dca2696.1