Dca27182.1
Annotation
- 4-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold270)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27182.1 |
13 |
110 |
479 |
6.68 |
98 |
33 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
3 |
99 |
1296 |
7.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27182.1 |
16 |
110 |
479 |
6.47 |
95 |
33 |
1e-05
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
7 |
100 |
369 |
25.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold270 |
Augustus |
mRNA |
164155 |
166216 |
. |
+ |
. |
ID=Dca27182.1;Parent=Dca27182 |
| scaffold270 |
Augustus |
exon |
164155 |
164472 |
. |
+ |
. |
ID=Dca27182.1.exon1;Parent=Dca27182.1 |
| scaffold270 |
Augustus |
exon |
164682 |
164767 |
. |
+ |
. |
ID=Dca27182.1.exon2;Parent=Dca27182.1 |
| scaffold270 |
Augustus |
exon |
164844 |
165157 |
. |
+ |
. |
ID=Dca27182.1.exon3;Parent=Dca27182.1 |
| scaffold270 |
Augustus |
exon |
165495 |
166216 |
. |
+ |
. |
ID=Dca27182.1.exon4;Parent=Dca27182.1 |
