Carnation DB

Dca27227.1

Annotation

5-exons
f-1
sp|B9HTA9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_804871#unknown#0F0P0C
AT1G67600.1 | Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr1:25336701-25337455 REVERSE LENGTH=163
Repeat List (scaffold2706)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27227.1	23	165	174	67.81	143	83	1e-66
Target_name	Start	End	Length	Cov(%)
sp\|B9HTA9_POPTR	24	166	174	82.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27227.1	11	166	174	66.09	156	74	4e-64
Target_name	Start	End	Length	Cov(%)
AT1G67600.1	4	159	163	95.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2706	Augus-PASA	mRNA	28460	31650	.	-	.	ID=Dca27227.1;Parent=Dca27227
scaffold2706	Augus-PASA	exon	28460	28543	.	-	.	ID=Dca27227.1.exon1;Parent=Dca27227.1
scaffold2706	Augus-PASA	exon	28855	28947	.	-	.	ID=Dca27227.1.exon2;Parent=Dca27227.1
scaffold2706	Augus-PASA	exon	29271	29321	.	-	.	ID=Dca27227.1.exon3;Parent=Dca27227.1
scaffold2706	Augus-PASA	exon	29483	29639	.	-	.	ID=Dca27227.1.exon4;Parent=Dca27227.1
scaffold2706	Augus-PASA	exon	31511	31650	.	-	.	ID=Dca27227.1.exon5;Parent=Dca27227.1