Carnation DB

Dca28089.1

Annotation

8-exons
f-1
sp|D7U9F8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0062g00010#GO:0003723#1F0P0C
AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-13159078 FORWARD LENGTH=861
Repeat List (scaffold28)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28089.1	1	857	928	53.77	857	49	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U9F8_VITVI	1	1011	1017	99.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28089.1	532	710	928	6.25	179	32	6e-18
Target_name	Start	End	Length	Cov(%)
AT4G25880.1	672	857	861	21.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold28	Augus-PASA	mRNA	371952	376119	.	-	.	ID=Dca28089.1;Parent=Dca28089
scaffold28	Augus-PASA	exon	371952	372335	.	-	.	ID=Dca28089.1.exon1;Parent=Dca28089.1
scaffold28	Augus-PASA	exon	372578	372772	.	-	.	ID=Dca28089.1.exon2;Parent=Dca28089.1
scaffold28	Augus-PASA	exon	372867	372977	.	-	.	ID=Dca28089.1.exon3;Parent=Dca28089.1
scaffold28	Augus-PASA	exon	373063	373275	.	-	.	ID=Dca28089.1.exon4;Parent=Dca28089.1
scaffold28	Augus-PASA	exon	373598	373705	.	-	.	ID=Dca28089.1.exon5;Parent=Dca28089.1
scaffold28	Augus-PASA	exon	373794	373935	.	-	.	ID=Dca28089.1.exon6;Parent=Dca28089.1
scaffold28	Augustus	exon	374024	375156	.	-	.	ID=Dca28089.1.exon7;Parent=Dca28089.1
scaffold28	Augustus	exon	375619	376119	.	-	.	ID=Dca28089.1.exon8;Parent=Dca28089.1