Carnation DB

Dca28501.1

Annotation

7-exons
f-1
sp|B9GV19_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_711107#GO:0010181;GO:0004733;GO:0008615#2F1P0C
Os10t0377800-01 Similar to Pyridoxamine 5-phosphate oxidase.
Repeat List (scaffold284)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28501.1	8	210	210	59.52	203	62	2e-70
Target_name	Start	End	Length	Cov(%)
sp\|B9GV19_POPTR	252	453	453	44.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28501.1	8	210	210	56.66	203	59	2e-70
Target_name	Start	End	Length	Cov(%)
Os10t0377800-01	347	548	549	36.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold284	Augustus	mRNA	185095	186595	.	-	.	ID=Dca28501.1;Parent=Dca28501
scaffold284	Augustus	exon	185095	185164	.	-	.	ID=Dca28501.1.exon1;Parent=Dca28501.1
scaffold284	Augustus	exon	185286	185381	.	-	.	ID=Dca28501.1.exon2;Parent=Dca28501.1
scaffold284	Augustus	exon	185493	185563	.	-	.	ID=Dca28501.1.exon3;Parent=Dca28501.1
scaffold284	Augustus	exon	185648	185752	.	-	.	ID=Dca28501.1.exon4;Parent=Dca28501.1
scaffold284	Augustus	exon	185851	185992	.	-	.	ID=Dca28501.1.exon5;Parent=Dca28501.1
scaffold284	Augustus	exon	186075	186163	.	-	.	ID=Dca28501.1.exon6;Parent=Dca28501.1
scaffold284	Augustus	exon	186536	186595	.	-	.	ID=Dca28501.1.exon7;Parent=Dca28501.1