Dca28547.1
Annotation
- 4-exons
- f-1
- sp|B9RPN1_RICCO#Huntingtin interacting protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1546600#GO:0018024#1F0P0C
- Repeat List (scaffold2847)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28547.1 |
43 |
1064 |
1097 |
45.76 |
1022 |
46 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RPN1_RICCO |
164 |
1228 |
2430 |
43.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28547.1 |
44 |
1063 |
1097 |
38.28 |
1020 |
38 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G15180.1 |
136 |
1129 |
2335 |
42.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2847 |
Augustus |
mRNA |
11118 |
16215 |
. |
- |
. |
ID=Dca28547.1;Parent=Dca28547 |
| scaffold2847 |
Augustus |
exon |
11118 |
12361 |
. |
- |
. |
ID=Dca28547.1.exon1;Parent=Dca28547.1 |
| scaffold2847 |
Augustus |
exon |
13319 |
13375 |
. |
- |
. |
ID=Dca28547.1.exon2;Parent=Dca28547.1 |
| scaffold2847 |
Augustus |
exon |
14087 |
15694 |
. |
- |
. |
ID=Dca28547.1.exon3;Parent=Dca28547.1 |
| scaffold2847 |
Augustus |
exon |
15831 |
16215 |
. |
- |
. |
ID=Dca28547.1.exon4;Parent=Dca28547.1 |
