Dca28600.1
Annotation
- 4-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2850)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28600.1 |
11 |
730 |
880 |
31.25 |
720 |
37 |
6e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
278 |
1026 |
1110 |
67.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28600.1 |
51 |
655 |
880 |
20.9 |
605 |
31 |
6e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
238 |
842 |
857 |
70.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2850 |
Augustus |
mRNA |
36670 |
40372 |
. |
+ |
. |
ID=Dca28600.1;Parent=Dca28600 |
| scaffold2850 |
Augustus |
exon |
36670 |
38672 |
. |
+ |
. |
ID=Dca28600.1.exon1;Parent=Dca28600.1 |
| scaffold2850 |
Augustus |
exon |
38751 |
39023 |
. |
+ |
. |
ID=Dca28600.1.exon2;Parent=Dca28600.1 |
| scaffold2850 |
Augustus |
exon |
39328 |
39461 |
. |
+ |
. |
ID=Dca28600.1.exon3;Parent=Dca28600.1 |
| scaffold2850 |
Augustus |
exon |
40140 |
40372 |
. |
+ |
. |
ID=Dca28600.1.exon4;Parent=Dca28600.1 |
