Carnation DB

Dca28685.1

Annotation

15-exons
f-1
sp|G7KG24_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g077840#GO:0003824;GO:0000166#2F0P0C
sp|B9T120_RICCO#Molybdopterin biosynthesis moeb protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0458510#GO:0003824;GO:0000166#2F0P0C
Repeat List (scaffold286)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28685.1	20	408	743	42.93	389	83	0
Target_name	Start	End	Length	Cov(%)
sp\|G7KG24_MEDTR	65	453	459	84.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28685.1	12	408	743	41.58	397	78	1e-179
Target_name	Start	End	Length	Cov(%)
AT5G37530.1	55	451	457	86.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold286	Augustus	mRNA	46376	52451	.	+	.	ID=Dca28685.1;Parent=Dca28685
scaffold286	Augustus	exon	46376	46479	.	+	.	ID=Dca28685.1.exon1;Parent=Dca28685.1
scaffold286	Augustus	exon	46693	46840	.	+	.	ID=Dca28685.1.exon2;Parent=Dca28685.1
scaffold286	Augustus	exon	47097	47309	.	+	.	ID=Dca28685.1.exon3;Parent=Dca28685.1
scaffold286	Augustus	exon	47468	47602	.	+	.	ID=Dca28685.1.exon4;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	47872	48006	.	+	.	ID=Dca28685.1.exon5;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	48133	48348	.	+	.	ID=Dca28685.1.exon6;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	48737	48861	.	+	.	ID=Dca28685.1.exon7;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	49107	49164	.	+	.	ID=Dca28685.1.exon8;Parent=Dca28685.1
scaffold286	Augustus	exon	49565	49655	.	+	.	ID=Dca28685.1.exon9;Parent=Dca28685.1
scaffold286	Augustus	exon	50633	50685	.	+	.	ID=Dca28685.1.exon10;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	51128	51373	.	+	.	ID=Dca28685.1.exon11;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	51455	51647	.	+	.	ID=Dca28685.1.exon12;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	51757	51898	.	+	.	ID=Dca28685.1.exon13;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	51999	52130	.	+	.	ID=Dca28685.1.exon14;Parent=Dca28685.1
scaffold286	Augus-PASA	exon	52211	52451	.	+	.	ID=Dca28685.1.exon15;Parent=Dca28685.1