Carnation DB

Dca28706.1

Annotation

12-exons
f-1
sp|D7TD90_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0057g01220#GO:0016021;GO:0006810#0F1P1C
sp|B9S9V9_RICCO#Coated vesicle membrane protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0522630#GO:0016021;GO:0016760;GO:0007047;GO:0030244;GO:0006810#1F3P1C
Repeat List (scaffold2862)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28706.1	219	420	420	36.66	202	76	1e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7TD90_VITVI	12	214	214	94.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28706.1	219	420	420	33.57	202	70	1e-81
Target_name	Start	End	Length	Cov(%)
AT3G07680.1	6	208	208	97.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2862	Augus-PASA	mRNA	30318	39779	.	-	.	ID=Dca28706.1;Parent=Dca28706
scaffold2862	Augus-PASA	exon	30318	30451	.	-	.	ID=Dca28706.1.exon1;Parent=Dca28706.1
scaffold2862	Augus-PASA	exon	30988	31095	.	-	.	ID=Dca28706.1.exon2;Parent=Dca28706.1
scaffold2862	Augus-PASA	exon	31195	31381	.	-	.	ID=Dca28706.1.exon3;Parent=Dca28706.1
scaffold2862	Augus-PASA	exon	33003	33203	.	-	.	ID=Dca28706.1.exon4;Parent=Dca28706.1
scaffold2862	Augustus	exon	36370	36423	.	-	.	ID=Dca28706.1.exon5;Parent=Dca28706.1
scaffold2862	Augustus	exon	36821	36891	.	-	.	ID=Dca28706.1.exon6;Parent=Dca28706.1
scaffold2862	Augustus	exon	37088	37133	.	-	.	ID=Dca28706.1.exon7;Parent=Dca28706.1
scaffold2862	Augustus	exon	37710	37770	.	-	.	ID=Dca28706.1.exon8;Parent=Dca28706.1
scaffold2862	Augustus	exon	38176	38269	.	-	.	ID=Dca28706.1.exon9;Parent=Dca28706.1
scaffold2862	Augustus	exon	38613	38647	.	-	.	ID=Dca28706.1.exon10;Parent=Dca28706.1
scaffold2862	Augustus	exon	38744	38929	.	-	.	ID=Dca28706.1.exon11;Parent=Dca28706.1
scaffold2862	Augustus	exon	39694	39779	.	-	.	ID=Dca28706.1.exon12;Parent=Dca28706.1