Carnation DB

Dca28712.1

Annotation

5-exons
f-1
sp|A5B1U8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021550#GO:0003824#1F0P0C
Repeat List (scaffold2863)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28712.1	15	123	153	30.71	109	44	8e-18
Target_name	Start	End	Length	Cov(%)
sp\|A5B1U8_VITVI	68	174	294	36.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28712.1	15	123	153	24.18	109	34	4e-08
Target_name	Start	End	Length	Cov(%)
AT3G23360.1	57	153	260	37.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2863	Augus-PASA	mRNA	7837	12631	.	-	.	ID=Dca28712.1;Parent=Dca28712
scaffold2863	Augus-PASA	exon	7837	7931	.	-	.	ID=Dca28712.1.exon1;Parent=Dca28712.1
scaffold2863	Augus-PASA	exon	9827	9898	.	-	.	ID=Dca28712.1.exon2;Parent=Dca28712.1
scaffold2863	Augustus	exon	11906	11963	.	-	.	ID=Dca28712.1.exon3;Parent=Dca28712.1
scaffold2863	Augustus	exon	12092	12154	.	-	.	ID=Dca28712.1.exon4;Parent=Dca28712.1
scaffold2863	Augustus	exon	12458	12631	.	-	.	ID=Dca28712.1.exon5;Parent=Dca28712.1