Dca28777.1
Annotation
- 4-exons
- f-1
- sp|B9N7I9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1117449#GO:0005524;GO:0004674#2F0P0C
- Os05t0110900-01 Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-).
- Repeat List (scaffold2871)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28777.1 |
125 |
220 |
225 |
34.22 |
96 |
81 |
1e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7I9_POPTR |
84 |
176 |
399 |
23.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28777.1 |
125 |
220 |
225 |
32 |
96 |
75 |
4e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0110900-01 |
80 |
172 |
396 |
23.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2871 |
Augustus |
mRNA |
29551 |
35466 |
. |
- |
. |
ID=Dca28777.1;Parent=Dca28777 |
| scaffold2871 |
Augustus |
exon |
29551 |
29592 |
. |
- |
. |
ID=Dca28777.1.exon1;Parent=Dca28777.1 |
| scaffold2871 |
Augustus |
exon |
29680 |
29814 |
. |
- |
. |
ID=Dca28777.1.exon2;Parent=Dca28777.1 |
| scaffold2871 |
Augustus |
exon |
30258 |
30389 |
. |
- |
. |
ID=Dca28777.1.exon3;Parent=Dca28777.1 |
| scaffold2871 |
Augustus |
exon |
35098 |
35466 |
. |
- |
. |
ID=Dca28777.1.exon4;Parent=Dca28777.1 |
