Carnation DB

Dca28847.1

Annotation

6-exons
f-1
sp|G7KY60_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g073340#GO:0016020#0F0P1C
AT2G38550.1 | Symbols: | Transmembrane proteins 14C | chr2:16132178-16134229 FORWARD LENGTH=335
Repeat List (scaffold288)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28847.1	49	306	308	49.02	258	59	1e-74
Target_name	Start	End	Length	Cov(%)
sp\|G7KY60_MEDTR	54	308	308	82.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28847.1	52	292	308	39.93	241	51	2e-63
Target_name	Start	End	Length	Cov(%)
AT2G38550.1	68	309	335	72.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold288	Augus-PASA	mRNA	66191	69624	.	-	.	ID=Dca28847.1;Parent=Dca28847
scaffold288	Augus-PASA	exon	66191	66278	.	-	.	ID=Dca28847.1.exon1;Parent=Dca28847.1
scaffold288	Augus-PASA	exon	66710	66747	.	-	.	ID=Dca28847.1.exon2;Parent=Dca28847.1
scaffold288	Augus-PASA	exon	66865	66911	.	-	.	ID=Dca28847.1.exon3;Parent=Dca28847.1
scaffold288	Augus-PASA	exon	67749	67916	.	-	.	ID=Dca28847.1.exon4;Parent=Dca28847.1
scaffold288	Augus-PASA	exon	68375	68765	.	-	.	ID=Dca28847.1.exon5;Parent=Dca28847.1
scaffold288	Augus-PASA	exon	69430	69624	.	-	.	ID=Dca28847.1.exon6;Parent=Dca28847.1
scaffold288	Augus-PASA	mRNA	66191	69624	.	-	.	ID=Dca28847.2;Parent=Dca28847
scaffold288	Augus-PASA	exon	66191	66278	.	-	.	ID=Dca28847.2.exon1;Parent=Dca28847.2
scaffold288	Augus-PASA	exon	66710	66747	.	-	.	ID=Dca28847.2.exon2;Parent=Dca28847.2
scaffold288	Augus-PASA	exon	66865	66911	.	-	.	ID=Dca28847.2.exon3;Parent=Dca28847.2
scaffold288	Augus-PASA	exon	67749	67916	.	-	.	ID=Dca28847.2.exon4;Parent=Dca28847.2
scaffold288	Augus-PASA	exon	68375	68762	.	-	.	ID=Dca28847.2.exon5;Parent=Dca28847.2
scaffold288	Augus-PASA	exon	69430	69624	.	-	.	ID=Dca28847.2.exon6;Parent=Dca28847.2