Carnation DB

Dca28850.1

Annotation

12-exons
f-1
sp|B9IGT0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_577177#GO:0005634;GO:0003677;GO:0008270;GO:0006355;GO:0006351#2F2P1C
AT4G32010.1 | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 | chr4:15481231-15484897 FORWARD LENGTH=780
Repeat List (scaffold288)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28850.1	5	759	814	53.56	755	52	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IGT0_POPTR	9	824	917	88.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28850.1	5	759	814	45.82	755	49	0
Target_name	Start	End	Length	Cov(%)
AT4G32010.1	7	714	780	90.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold288	Augustus	mRNA	96596	102567	.	+	.	ID=Dca28850.1;Parent=Dca28850
scaffold288	Augustus	exon	96596	96705	.	+	.	ID=Dca28850.1.exon1;Parent=Dca28850.1
scaffold288	Augustus	exon	97823	97904	.	+	.	ID=Dca28850.1.exon2;Parent=Dca28850.1
scaffold288	Augustus	exon	97984	98085	.	+	.	ID=Dca28850.1.exon3;Parent=Dca28850.1
scaffold288	Augustus	exon	98937	99565	.	+	.	ID=Dca28850.1.exon4;Parent=Dca28850.1
scaffold288	Augustus	exon	99660	99756	.	+	.	ID=Dca28850.1.exon5;Parent=Dca28850.1
scaffold288	Augustus	exon	99857	100031	.	+	.	ID=Dca28850.1.exon6;Parent=Dca28850.1
scaffold288	Augustus	exon	100132	100205	.	+	.	ID=Dca28850.1.exon7;Parent=Dca28850.1
scaffold288	Augustus	exon	100385	100735	.	+	.	ID=Dca28850.1.exon8;Parent=Dca28850.1
scaffold288	Augustus	exon	101061	101110	.	+	.	ID=Dca28850.1.exon9;Parent=Dca28850.1
scaffold288	Augustus	exon	101425	101538	.	+	.	ID=Dca28850.1.exon10;Parent=Dca28850.1
scaffold288	Augustus	exon	101616	101683	.	+	.	ID=Dca28850.1.exon11;Parent=Dca28850.1
scaffold288	Augus-PASA	exon	101975	102567	.	+	.	ID=Dca28850.1.exon12;Parent=Dca28850.1