Carnation DB

Dca28863.1

Annotation

5-exons
f-1
sp|B9N618_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_672332#GO:0005525;GO:0015031;GO:0007264#1F2P0C
Os05t0564400-02 Similar to GTP-binding protein.
Repeat List (scaffold288)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28863.1	144	198	225	16.44	55	68	5e-14
Target_name	Start	End	Length	Cov(%)
sp\|B9N618_POPTR	140	194	216	25.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28863.1	105	195	225	19.55	91	48	1e-14
Target_name	Start	End	Length	Cov(%)
Os05t0564400-02	98	190	218	42.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold288	Augustus	mRNA	173819	182745	.	+	.	ID=Dca28863.1;Parent=Dca28863
scaffold288	Augustus	exon	173819	174023	.	+	.	ID=Dca28863.1.exon1;Parent=Dca28863.1
scaffold288	Augustus	exon	180424	180481	.	+	.	ID=Dca28863.1.exon2;Parent=Dca28863.1
scaffold288	Augustus	exon	181393	181461	.	+	.	ID=Dca28863.1.exon3;Parent=Dca28863.1
scaffold288	Augustus	exon	181569	181674	.	+	.	ID=Dca28863.1.exon4;Parent=Dca28863.1
scaffold288	Augustus	exon	182506	182745	.	+	.	ID=Dca28863.1.exon5;Parent=Dca28863.1