Dca28868.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold288)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28868.1 |
90 |
219 |
222 |
34.23 |
130 |
59 |
5e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
341 |
469 |
1038 |
12.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28868.1 |
138 |
220 |
222 |
17.11 |
83 |
44 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0327700-01 |
1 |
84 |
87 |
96.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold288 |
Augustus |
mRNA |
219449 |
220318 |
. |
- |
. |
ID=Dca28868.1;Parent=Dca28868 |
| scaffold288 |
Augustus |
exon |
219449 |
219864 |
. |
- |
. |
ID=Dca28868.1.exon1;Parent=Dca28868.1 |
| scaffold288 |
Augustus |
exon |
220066 |
220318 |
. |
- |
. |
ID=Dca28868.1.exon2;Parent=Dca28868.1 |
