Dca28895.1
Annotation
- 2-exons
- f-1
- sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold2880)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28895.1 |
43 |
259 |
259 |
38.22 |
217 |
46 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81068_ARATH |
738 |
954 |
1529 |
14.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28895.1 |
57 |
259 |
259 |
31.66 |
203 |
41 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
350 |
553 |
857 |
23.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2880 |
Augustus |
mRNA |
53566 |
55302 |
. |
+ |
. |
ID=Dca28895.1;Parent=Dca28895 |
| scaffold2880 |
Augustus |
exon |
53566 |
53646 |
. |
+ |
. |
ID=Dca28895.1.exon1;Parent=Dca28895.1 |
| scaffold2880 |
Augustus |
exon |
54604 |
55302 |
. |
+ |
. |
ID=Dca28895.1.exon2;Parent=Dca28895.1 |
