Carnation DB

Dca28907.1

Annotation

5-exons
f-1
sp|B9SAS2_RICCO#Magnesium/proton exchanger, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1178350#GO:0016021;GO:0055085#0F1P1C
Repeat List (scaffold2882)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28907.1	35	81	124	36.29	47	96	3e-20
Target_name	Start	End	Length	Cov(%)
sp\|B9SAS2_RICCO	609	655	1015	4.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28907.1	35	81	124	35.48	47	94	1e-20
Target_name	Start	End	Length	Cov(%)
AT2G47600.1	132	178	539	8.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2882	Augustus	mRNA	40747	42534	.	-	.	ID=Dca28907.1;Parent=Dca28907
scaffold2882	Augustus	exon	40747	40753	.	-	.	ID=Dca28907.1.exon1;Parent=Dca28907.1
scaffold2882	Augustus	exon	40890	40980	.	-	.	ID=Dca28907.1.exon2;Parent=Dca28907.1
scaffold2882	Augustus	exon	41284	41460	.	-	.	ID=Dca28907.1.exon3;Parent=Dca28907.1
scaffold2882	Augustus	exon	41871	41918	.	-	.	ID=Dca28907.1.exon4;Parent=Dca28907.1
scaffold2882	Augustus	exon	42483	42534	.	-	.	ID=Dca28907.1.exon5;Parent=Dca28907.1