Carnation DB

Dca28910.1

Annotation

7-exons
f-1
sp|D7T780_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04620#unknown#0F0P0C
Os03t0797600-01 Similar to Helix-loop-helix protein homolog.
Repeat List (scaffold2883)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28910.1	1	339	340	58.82	339	59	7e-94
Target_name	Start	End	Length	Cov(%)
sp\|D7T780_VITVI	1	312	313	99.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28910.1	103	322	340	42.35	220	64	1e-70
Target_name	Start	End	Length	Cov(%)
Os03t0797600-01	64	278	295	72.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2883	Augus-PASA	mRNA	28096	33993	.	+	.	ID=Dca28910.1;Parent=Dca28910
scaffold2883	Augus-PASA	exon	28096	28461	.	+	.	ID=Dca28910.1.exon1;Parent=Dca28910.1
scaffold2883	Augus-PASA	exon	30226	30321	.	+	.	ID=Dca28910.1.exon2;Parent=Dca28910.1
scaffold2883	Augus-PASA	exon	32622	32741	.	+	.	ID=Dca28910.1.exon3;Parent=Dca28910.1
scaffold2883	Augus-PASA	exon	32909	32974	.	+	.	ID=Dca28910.1.exon4;Parent=Dca28910.1
scaffold2883	Augus-PASA	exon	33142	33207	.	+	.	ID=Dca28910.1.exon5;Parent=Dca28910.1
scaffold2883	Augus-PASA	exon	33364	33441	.	+	.	ID=Dca28910.1.exon6;Parent=Dca28910.1
scaffold2883	Augus-PASA	exon	33763	33993	.	+	.	ID=Dca28910.1.exon7;Parent=Dca28910.1