Dca28930.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2889)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28930.1 |
1 |
238 |
238 |
57.98 |
238 |
58 |
7e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
585 |
796 |
896 |
23.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28930.1 |
11 |
231 |
238 |
31.09 |
221 |
33 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1132 |
1318 |
1428 |
13.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2889 |
Augustus |
mRNA |
13063 |
14360 |
. |
+ |
. |
ID=Dca28930.1;Parent=Dca28930 |
| scaffold2889 |
Augustus |
exon |
13063 |
13449 |
. |
+ |
. |
ID=Dca28930.1.exon1;Parent=Dca28930.1 |
| scaffold2889 |
Augustus |
exon |
14031 |
14360 |
. |
+ |
. |
ID=Dca28930.1.exon2;Parent=Dca28930.1 |
