Dca28964.1
Annotation
- 4-exons
- f-1
- sp|B9GMW8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_708892#GO:0048046;GO:0004553;GO:0016762;GO:0006073#2F1P1C
- sp|A0MA74_BETPN#Xyloglucan endotransglucosylase#Betula pendula (European white birch) (Betula verrucosa)#unknown#GO:0048046;GO:0005618;GO:0004553;GO:0016762;GO:0006073#2F1P2C
- Repeat List (scaffold2890)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28964.1 |
27 |
149 |
149 |
73.82 |
123 |
90 |
1e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GMW8_POPTR |
18 |
140 |
293 |
41.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28964.1 |
10 |
149 |
149 |
68.45 |
140 |
73 |
4e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G06850.1 |
7 |
143 |
296 |
46.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2890 |
Augustus |
mRNA |
22537 |
24102 |
. |
+ |
. |
ID=Dca28964.1;Parent=Dca28964 |
| scaffold2890 |
Augustus |
exon |
22537 |
22750 |
. |
+ |
. |
ID=Dca28964.1.exon1;Parent=Dca28964.1 |
| scaffold2890 |
Augustus |
exon |
23147 |
23247 |
. |
+ |
. |
ID=Dca28964.1.exon2;Parent=Dca28964.1 |
| scaffold2890 |
Augustus |
exon |
23363 |
23496 |
. |
+ |
. |
ID=Dca28964.1.exon3;Parent=Dca28964.1 |
| scaffold2890 |
Augustus |
exon |
23700 |
24102 |
. |
+ |
. |
ID=Dca28964.1.exon4;Parent=Dca28964.1 |
