Carnation DB

Dca30123.1

Annotation

9-exons
f-1
sp|F6HM96_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g01270#unknown#0F0P0C
AT1G29170.1 | Symbols: WAVE2, ATSCAR3, SCAR3 | SCAR family protein | chr1:10190352-10194900 REVERSE LENGTH=1020
Repeat List (scaffold30)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30123.1	969	1296	1296	11.88	328	42	3e-47
Target_name	Start	End	Length	Cov(%)
sp\|F6HM96_VITVI	577	939	939	38.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30123.1	641	1296	1296	15.5	656	31	2e-37
Target_name	Start	End	Length	Cov(%)
AT1G29170.1	415	1020	1020	59.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold30	Augustus	mRNA	448621	454835	.	-	.	ID=Dca30123.1;Parent=Dca30123
scaffold30	Augustus	exon	448621	448665	.	-	.	ID=Dca30123.1.exon1;Parent=Dca30123.1
scaffold30	Augustus	exon	449137	449253	.	-	.	ID=Dca30123.1.exon2;Parent=Dca30123.1
scaffold30	Augustus	exon	449415	449516	.	-	.	ID=Dca30123.1.exon3;Parent=Dca30123.1
scaffold30	Augustus	exon	449612	452591	.	-	.	ID=Dca30123.1.exon4;Parent=Dca30123.1
scaffold30	Augustus	exon	452679	452746	.	-	.	ID=Dca30123.1.exon5;Parent=Dca30123.1
scaffold30	Augustus	exon	452976	453108	.	-	.	ID=Dca30123.1.exon6;Parent=Dca30123.1
scaffold30	Augustus	exon	453193	453316	.	-	.	ID=Dca30123.1.exon7;Parent=Dca30123.1
scaffold30	Augustus	exon	453565	453728	.	-	.	ID=Dca30123.1.exon8;Parent=Dca30123.1
scaffold30	Augustus	exon	454678	454835	.	-	.	ID=Dca30123.1.exon9;Parent=Dca30123.1