Carnation DB

Dca30154.1

Annotation

5-exons
f-1
sp|A5BA39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041694#GO:0003676;GO:0015074#1F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold3001)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30154.1	195	521	521	38.57	327	56	1e-103
Target_name	Start	End	Length	Cov(%)
sp\|A5BA39_VITVI	80	438	1099	32.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30154.1	3	110	112	50	108	52	9e-28
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	85	192	1262	8.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3001	Augustus	mRNA	5150	9445	.	-	.	ID=Dca30154.1;Parent=Dca30154
scaffold3001	Augustus	exon	5150	5783	.	-	.	ID=Dca30154.1.exon1;Parent=Dca30154.1
scaffold3001	Augustus	exon	6028	6614	.	-	.	ID=Dca30154.1.exon2;Parent=Dca30154.1
scaffold3001	Augustus	exon	6708	7117	.	-	.	ID=Dca30154.1.exon3;Parent=Dca30154.1
scaffold3001	Augustus	exon	7222	7645	.	-	.	ID=Dca30154.1.exon4;Parent=Dca30154.1
scaffold3001	Augustus	exon	9302	9445	.	-	.	ID=Dca30154.1.exon5;Parent=Dca30154.1