Dca30385.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold30321)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30385.1 |
80 |
173 |
173 |
36.41 |
94 |
68 |
6e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
565 |
658 |
1313 |
7.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30385.1 |
80 |
173 |
173 |
19.65 |
94 |
36 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
534 |
628 |
1428 |
6.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30321 |
Augustus |
mRNA |
1 |
1036 |
. |
- |
. |
ID=Dca30385.1;Parent=Dca30385 |
| scaffold30321 |
Augustus |
exon |
1 |
280 |
. |
- |
. |
ID=Dca30385.1.exon1;Parent=Dca30385.1 |
| scaffold30321 |
Augustus |
exon |
796 |
1036 |
. |
- |
. |
ID=Dca30385.1.exon2;Parent=Dca30385.1 |
