Carnation DB

Dca30448.1

Annotation

16-exons
f-1
sp|B9IAK9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_807645#GO:0008270#1F0P0C
AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | Transducin/WD40 repeat-like superfamily protein | chr2:13978000-13983282 FORWARD LENGTH=675
Repeat List (scaffold304)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30448.1	1	600	956	43.82	600	64	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IAK9_POPTR	1	652	672	97.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30448.1	1	600	956	43.2	600	63	0
Target_name	Start	End	Length	Cov(%)
AT2G32950.1	1	655	675	97.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold304	Augustus	mRNA	110422	124178	.	-	.	ID=Dca30448.1;Parent=Dca30448
scaffold304	Augustus	exon	110422	110533	.	-	.	ID=Dca30448.1.exon1;Parent=Dca30448.1
scaffold304	Augustus	exon	110842	110924	.	-	.	ID=Dca30448.1.exon2;Parent=Dca30448.1
scaffold304	Augustus	exon	110996	111787	.	-	.	ID=Dca30448.1.exon3;Parent=Dca30448.1
scaffold304	Augustus	exon	112133	112221	.	-	.	ID=Dca30448.1.exon4;Parent=Dca30448.1
scaffold304	Augustus	exon	114595	114697	.	-	.	ID=Dca30448.1.exon5;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	114804	114914	.	-	.	ID=Dca30448.1.exon6;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	115609	115788	.	-	.	ID=Dca30448.1.exon7;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	116249	116353	.	-	.	ID=Dca30448.1.exon8;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	117185	117283	.	-	.	ID=Dca30448.1.exon9;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	117396	117551	.	-	.	ID=Dca30448.1.exon10;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	118385	118463	.	-	.	ID=Dca30448.1.exon11;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	119527	119592	.	-	.	ID=Dca30448.1.exon12;Parent=Dca30448.1
scaffold304	Augus-PASA	exon	119694	119851	.	-	.	ID=Dca30448.1.exon13;Parent=Dca30448.1
scaffold304	Augustus	exon	120371	120724	.	-	.	ID=Dca30448.1.exon14;Parent=Dca30448.1
scaffold304	Augustus	exon	123704	123781	.	-	.	ID=Dca30448.1.exon15;Parent=Dca30448.1
scaffold304	Augustus	exon	123873	124178	.	-	.	ID=Dca30448.1.exon16;Parent=Dca30448.1