Dca30507.1
Annotation
- 4-exons
- f-1
- sp|A9PHS0_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0046522;GO:0009086#1F1P0C
- AT1G49820.1 | Symbols: ATMTK, MTK | S-methyl-5-thioribose kinase | chr1:18443005-18444907 FORWARD LENGTH=420
- Repeat List (scaffold3048)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30507.1 |
7 |
257 |
260 |
77.3 |
251 |
81 |
2e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PHS0_POPTR |
166 |
416 |
418 |
60.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30507.1 |
7 |
257 |
260 |
76.53 |
251 |
80 |
1e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G49820.1 |
168 |
418 |
420 |
59.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3048 |
Augustus |
mRNA |
36016 |
38298 |
. |
- |
. |
ID=Dca30507.1;Parent=Dca30507 |
| scaffold3048 |
Augustus |
exon |
36016 |
36187 |
. |
- |
. |
ID=Dca30507.1.exon1;Parent=Dca30507.1 |
| scaffold3048 |
Augustus |
exon |
36505 |
36719 |
. |
- |
. |
ID=Dca30507.1.exon2;Parent=Dca30507.1 |
| scaffold3048 |
Augustus |
exon |
37813 |
38014 |
. |
- |
. |
ID=Dca30507.1.exon3;Parent=Dca30507.1 |
| scaffold3048 |
Augustus |
exon |
38105 |
38298 |
. |
- |
. |
ID=Dca30507.1.exon4;Parent=Dca30507.1 |
