Dca30558.1
Annotation
- 2-exons
- f-3
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold30545)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30558.1 |
81 |
250 |
254 |
37.4 |
170 |
56 |
6e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
465 |
635 |
1553 |
11.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30558.1 |
80 |
250 |
254 |
21.25 |
171 |
30 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
118 |
292 |
707 |
24.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30545 |
Augustus |
mRNA |
1 |
1185 |
. |
+ |
. |
ID=Dca30558.1;Parent=Dca30558 |
| scaffold30545 |
Augustus |
exon |
1 |
240 |
. |
+ |
. |
ID=Dca30558.1.exon1;Parent=Dca30558.1 |
| scaffold30545 |
Augustus |
exon |
662 |
1185 |
. |
+ |
. |
ID=Dca30558.1.exon2;Parent=Dca30558.1 |
