Dca30932.1
Annotation
- 3-exons
- f-1
- sp|Q9C8F4_ARATH#Ty1/copia-element polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T15P17.15#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold310)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30932.1 |
21 |
389 |
389 |
33.93 |
369 |
31 |
3e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9C8F4_ARATH |
22 |
445 |
1152 |
36.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30932.1 |
20 |
214 |
389 |
15.42 |
195 |
31 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
14 |
201 |
237 |
79.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold310 |
Augustus |
mRNA |
126790 |
128201 |
. |
- |
. |
ID=Dca30932.1;Parent=Dca30932 |
| scaffold310 |
Augustus |
exon |
126790 |
126824 |
. |
- |
. |
ID=Dca30932.1.exon1;Parent=Dca30932.1 |
| scaffold310 |
Augustus |
exon |
126905 |
127493 |
. |
- |
. |
ID=Dca30932.1.exon2;Parent=Dca30932.1 |
| scaffold310 |
Augustus |
exon |
127623 |
128201 |
. |
- |
. |
ID=Dca30932.1.exon3;Parent=Dca30932.1 |
