Carnation DB

Dca31217.1

Annotation

5-exons
f-1
sp|A2Y7S3_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_21092#GO:0003676;GO:0008270#2F0P0C
Os06t0704400-02 Transposase, MuDR, plant domain containing protein.
Repeat List (scaffold3138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31217.1	275	649	699	17.88	375	33	2e-52
Target_name	Start	End	Length	Cov(%)
sp\|A2Y7S3_ORYSI	478	854	1005	37.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31217.1	275	698	699	19.31	424	31	9e-45
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	315	730	805	51.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3138	Augustus	mRNA	25247	28077	.	-	.	ID=Dca31217.1;Parent=Dca31217
scaffold3138	Augustus	exon	25247	25947	.	-	.	ID=Dca31217.1.exon1;Parent=Dca31217.1
scaffold3138	Augustus	exon	26047	26401	.	-	.	ID=Dca31217.1.exon2;Parent=Dca31217.1
scaffold3138	Augustus	exon	26491	26710	.	-	.	ID=Dca31217.1.exon3;Parent=Dca31217.1
scaffold3138	Augustus	exon	26977	27702	.	-	.	ID=Dca31217.1.exon4;Parent=Dca31217.1
scaffold3138	Augustus	exon	27980	28077	.	-	.	ID=Dca31217.1.exon5;Parent=Dca31217.1