Dca31287.1
Annotation
- 3-exons
- f-1
- sp|Q9SL06_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05610#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3146)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31287.1 |
163 |
319 |
319 |
26.33 |
157 |
53 |
8e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL06_ARATH |
329 |
487 |
780 |
20.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31287.1 |
6 |
139 |
319 |
22.25 |
134 |
53 |
6e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0434800-00 |
201 |
332 |
336 |
39.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3146 |
Augustus |
mRNA |
11012 |
14461 |
. |
- |
. |
ID=Dca31287.1;Parent=Dca31287 |
| scaffold3146 |
Augustus |
exon |
11012 |
11463 |
. |
- |
. |
ID=Dca31287.1.exon1;Parent=Dca31287.1 |
| scaffold3146 |
Augustus |
exon |
11583 |
11673 |
. |
- |
. |
ID=Dca31287.1.exon2;Parent=Dca31287.1 |
| scaffold3146 |
Augustus |
exon |
14045 |
14461 |
. |
- |
. |
ID=Dca31287.1.exon3;Parent=Dca31287.1 |
