Carnation DB

Dca31443.1

Annotation

10-exons
f-1
sp|D7TK39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g03190#GO:0005634;GO:0030529;GO:0000166;GO:0003723;GO:0006396#2F1P2C
AT5G46250.1 | Symbols: | RNA-binding protein | chr5:18755388-18758056 FORWARD LENGTH=422
Repeat List (scaffold3167)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31443.1	12	326	329	57.14	315	56	3e-92
Target_name	Start	End	Length	Cov(%)
sp\|D7TK39_VITVI	6	339	342	97.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31443.1	40	324	329	49.24	285	52	6e-78
Target_name	Start	End	Length	Cov(%)
AT5G46250.1	101	410	422	73.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3167	Augus-PASA	mRNA	5440	8120	.	-	.	ID=Dca31443.1;Parent=Dca31443
scaffold3167	Augus-PASA	exon	5440	5558	.	-	.	ID=Dca31443.1.exon1;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	5648	5735	.	-	.	ID=Dca31443.1.exon2;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	6138	6245	.	-	.	ID=Dca31443.1.exon3;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	6330	6398	.	-	.	ID=Dca31443.1.exon4;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	6489	6536	.	-	.	ID=Dca31443.1.exon5;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	6643	6724	.	-	.	ID=Dca31443.1.exon6;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	6842	6921	.	-	.	ID=Dca31443.1.exon7;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	6997	7068	.	-	.	ID=Dca31443.1.exon8;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	7161	7255	.	-	.	ID=Dca31443.1.exon9;Parent=Dca31443.1
scaffold3167	Augus-PASA	exon	7892	8120	.	-	.	ID=Dca31443.1.exon10;Parent=Dca31443.1