Dca31831.1
Annotation
- 3-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3212)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31831.1 |
329 |
973 |
1022 |
20.93 |
645 |
32 |
4e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
500 |
1156 |
1449 |
45.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31831.1 |
371 |
771 |
1022 |
13.2 |
401 |
34 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
216 |
621 |
626 |
64.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3212 |
Augustus |
mRNA |
15530 |
20111 |
. |
+ |
. |
ID=Dca31831.1;Parent=Dca31831 |
| scaffold3212 |
Augustus |
exon |
15530 |
16510 |
. |
+ |
. |
ID=Dca31831.1.exon1;Parent=Dca31831.1 |
| scaffold3212 |
Augustus |
exon |
16881 |
18323 |
. |
+ |
. |
ID=Dca31831.1.exon2;Parent=Dca31831.1 |
| scaffold3212 |
Augustus |
exon |
19467 |
20111 |
. |
+ |
. |
ID=Dca31831.1.exon3;Parent=Dca31831.1 |
