Carnation DB

Dca31887.1

Annotation

6-exons
f-1
sp|B9I2B3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_661644#GO:0016021#0F0P1C
AT5G24650.1 | Symbols: | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr5:8437123-8438859 FORWARD LENGTH=259
Repeat List (scaffold322)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31887.1	6	262	264	67.04	257	69	4e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9I2B3_POPTR	3	258	262	97.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31887.1	1	263	264	54.92	263	56	1e-77
Target_name	Start	End	Length	Cov(%)
AT5G24650.1	1	255	259	98.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold322	Augus-PASA	mRNA	158422	161265	.	+	.	ID=Dca31887.1;Parent=Dca31887
scaffold322	Augus-PASA	exon	158422	158730	.	+	.	ID=Dca31887.1.exon1;Parent=Dca31887.1
scaffold322	Augus-PASA	exon	159896	160011	.	+	.	ID=Dca31887.1.exon2;Parent=Dca31887.1
scaffold322	Augus-PASA	exon	160219	160345	.	+	.	ID=Dca31887.1.exon3;Parent=Dca31887.1
scaffold322	Augus-PASA	exon	160630	160778	.	+	.	ID=Dca31887.1.exon4;Parent=Dca31887.1
scaffold322	Augustus	exon	161082	161144	.	+	.	ID=Dca31887.1.exon5;Parent=Dca31887.1
scaffold322	Augustus	exon	161235	161265	.	+	.	ID=Dca31887.1.exon6;Parent=Dca31887.1