Dca3254.1
Annotation
- 4-exons
- f-1
- sp|Q38M76_SOLTU#Putative uncharacterized protein#Solanum tuberosum (Potato)#unknown#GO:0005840;GO:0019843;GO:0003735;GO:0006412#2F1P1C
- Os09t0485900-01 Similar to 60S ribosomal protein L9 (Gibberellin-regulated protein GA).
- Repeat List (scaffold11151)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3254.1 |
548 |
614 |
615 |
9.91 |
67 |
90 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q38M76_SOLTU |
126 |
193 |
194 |
35.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3254.1 |
548 |
615 |
615 |
9.75 |
68 |
87 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0485900-01 |
122 |
190 |
191 |
36.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11151 |
Augustus |
mRNA |
12299 |
17160 |
. |
- |
. |
ID=Dca3254.1;Parent=Dca3254 |
| scaffold11151 |
Augustus |
exon |
12299 |
12385 |
. |
- |
. |
ID=Dca3254.1.exon1;Parent=Dca3254.1 |
| scaffold11151 |
Augustus |
exon |
12480 |
12599 |
. |
- |
. |
ID=Dca3254.1.exon2;Parent=Dca3254.1 |
| scaffold11151 |
Augustus |
exon |
15090 |
16051 |
. |
- |
. |
ID=Dca3254.1.exon3;Parent=Dca3254.1 |
| scaffold11151 |
Augustus |
exon |
16482 |
17160 |
. |
- |
. |
ID=Dca3254.1.exon4;Parent=Dca3254.1 |
