Dca33004.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3354)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33004.1 |
1 |
205 |
313 |
44.72 |
205 |
69 |
3e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1317 |
1521 |
1553 |
13.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33004.1 |
1 |
205 |
313 |
29.71 |
205 |
46 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
22 |
226 |
230 |
89.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3354 |
Augustus |
mRNA |
1914 |
4021 |
. |
+ |
. |
ID=Dca33004.1;Parent=Dca33004 |
| scaffold3354 |
Augustus |
exon |
1914 |
2535 |
. |
+ |
. |
ID=Dca33004.1.exon1;Parent=Dca33004.1 |
| scaffold3354 |
Augustus |
exon |
3357 |
3428 |
. |
+ |
. |
ID=Dca33004.1.exon2;Parent=Dca33004.1 |
| scaffold3354 |
Augustus |
exon |
3774 |
4021 |
. |
+ |
. |
ID=Dca33004.1.exon3;Parent=Dca33004.1 |
