Carnation DB

Dca33012.1

Annotation

6-exons
f-1
sp|G5DXE7_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT2G23093.1 | Symbols: | Major facilitator superfamily protein | chr2:9832193-9834416 FORWARD LENGTH=449
Repeat List (scaffold3355)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33012.1	46	200	200	60	155	78	2e-67
Target_name	Start	End	Length	Cov(%)
sp\|G5DXE7_SILLA	7	161	385	40.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33012.1	49	200	200	32.5	152	43	4e-33
Target_name	Start	End	Length	Cov(%)
AT2G23093.1	74	224	449	33.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3355	Augustus	mRNA	53142	57076	.	-	.	ID=Dca33012.1;Parent=Dca33012
scaffold3355	Augustus	exon	53142	53156	.	-	.	ID=Dca33012.1.exon1;Parent=Dca33012.1
scaffold3355	Augustus	exon	53265	53391	.	-	.	ID=Dca33012.1.exon2;Parent=Dca33012.1
scaffold3355	Augustus	exon	54205	54365	.	-	.	ID=Dca33012.1.exon3;Parent=Dca33012.1
scaffold3355	Augustus	exon	54569	54737	.	-	.	ID=Dca33012.1.exon4;Parent=Dca33012.1
scaffold3355	Augustus	exon	55189	55344	.	-	.	ID=Dca33012.1.exon5;Parent=Dca33012.1
scaffold3355	Augustus	exon	56961	57076	.	-	.	ID=Dca33012.1.exon6;Parent=Dca33012.1