Carnation DB

Dca33027.1

Annotation

8-exons
f-1
sp|B9SDM4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0422090#unknown#0F0P0C
AT2G35880.1 | Symbols: | TPX2 (targeting protein for Xklp2) protein family | chr2:15063204-15065259 REVERSE LENGTH=432
Repeat List (scaffold3358)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33027.1	64	481	482	36.51	418	40	3e-59
Target_name	Start	End	Length	Cov(%)
sp\|B9SDM4_RICCO	55	483	484	88.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33027.1	112	403	482	27.8	292	46	3e-48
Target_name	Start	End	Length	Cov(%)
AT2G35880.1	93	371	432	64.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3358	Augustus	mRNA	19617	22986	.	-	.	ID=Dca33027.1;Parent=Dca33027
scaffold3358	Augustus	exon	19617	20054	.	-	.	ID=Dca33027.1.exon1;Parent=Dca33027.1
scaffold3358	Augustus	exon	21385	21492	.	-	.	ID=Dca33027.1.exon2;Parent=Dca33027.1
scaffold3358	Augustus	exon	21611	21682	.	-	.	ID=Dca33027.1.exon3;Parent=Dca33027.1
scaffold3358	Augustus	exon	21782	21866	.	-	.	ID=Dca33027.1.exon4;Parent=Dca33027.1
scaffold3358	Augustus	exon	21966	22037	.	-	.	ID=Dca33027.1.exon5;Parent=Dca33027.1
scaffold3358	Augustus	exon	22123	22181	.	-	.	ID=Dca33027.1.exon6;Parent=Dca33027.1
scaffold3358	Augustus	exon	22274	22642	.	-	.	ID=Dca33027.1.exon7;Parent=Dca33027.1
scaffold3358	Augustus	exon	22741	22986	.	-	.	ID=Dca33027.1.exon8;Parent=Dca33027.1