Dca33028.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3358)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33028.1 |
1 |
146 |
146 |
65.75 |
146 |
52 |
8e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
705 |
892 |
964 |
19.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33028.1 |
20 |
146 |
146 |
26.71 |
127 |
31 |
8e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
406 |
526 |
1262 |
9.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3358 |
Augustus |
mRNA |
26016 |
26547 |
. |
- |
. |
ID=Dca33028.1;Parent=Dca33028 |
| scaffold3358 |
Augustus |
exon |
26016 |
26359 |
. |
- |
. |
ID=Dca33028.1.exon1;Parent=Dca33028.1 |
| scaffold3358 |
Augustus |
exon |
26451 |
26547 |
. |
- |
. |
ID=Dca33028.1.exon2;Parent=Dca33028.1 |
