Dca33047.1
Annotation
- 2-exons
- f-1
- sp|F4NCG6_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|B2BXY8_9BRAS#Non-LTR retrotransposon transposase#Arabidopsis cebennensis#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold336)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33047.1 |
180 |
342 |
349 |
20.34 |
163 |
43 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG6_BETVU |
1221 |
1386 |
1389 |
11.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33047.1 |
7 |
152 |
349 |
14.32 |
146 |
34 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
156 |
299 |
644 |
22.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold336 |
Augustus |
mRNA |
149457 |
151742 |
. |
- |
. |
ID=Dca33047.1;Parent=Dca33047 |
| scaffold336 |
Augustus |
exon |
149457 |
150043 |
. |
- |
. |
ID=Dca33047.1.exon1;Parent=Dca33047.1 |
| scaffold336 |
Augustus |
exon |
151280 |
151742 |
. |
- |
. |
ID=Dca33047.1.exon2;Parent=Dca33047.1 |
