Carnation DB

Dca33160.1

Annotation

12-exons
f-1
sp|C6TH05_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005634;GO:0003684;GO:0006289;GO:0043161#1F2P1C
AT3G02540.1 | Symbols: RAD23-3, RAD23C | Rad23 UV excision repair protein family | chr3:533095-536151 REVERSE LENGTH=419
Repeat List (scaffold338)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33160.1	1	391	391	69.56	391	68	7e-146
Target_name	Start	End	Length	Cov(%)
sp\|C6TH05_SOYBN	1	400	400	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33160.1	1	391	391	67	391	62	2e-139
Target_name	Start	End	Length	Cov(%)
AT3G02540.1	1	419	419	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold338	Augustus	mRNA	68155	74537	.	+	.	ID=Dca33160.1;Parent=Dca33160
scaffold338	Augustus	exon	68155	68220	.	+	.	ID=Dca33160.1.exon1;Parent=Dca33160.1
scaffold338	Augustus	exon	68962	69123	.	+	.	ID=Dca33160.1.exon2;Parent=Dca33160.1
scaffold338	Augustus	exon	70249	70308	.	+	.	ID=Dca33160.1.exon3;Parent=Dca33160.1
scaffold338	Augustus	exon	71107	71183	.	+	.	ID=Dca33160.1.exon4;Parent=Dca33160.1
scaffold338	Augustus	exon	71272	71343	.	+	.	ID=Dca33160.1.exon5;Parent=Dca33160.1
scaffold338	Augustus	exon	71450	71624	.	+	.	ID=Dca33160.1.exon6;Parent=Dca33160.1
scaffold338	Augustus	exon	71741	71881	.	+	.	ID=Dca33160.1.exon7;Parent=Dca33160.1
scaffold338	Augustus	exon	72387	72455	.	+	.	ID=Dca33160.1.exon8;Parent=Dca33160.1
scaffold338	Augustus	exon	72574	72621	.	+	.	ID=Dca33160.1.exon9;Parent=Dca33160.1
scaffold338	Augustus	exon	72805	72914	.	+	.	ID=Dca33160.1.exon10;Parent=Dca33160.1
scaffold338	Augustus	exon	73845	73923	.	+	.	ID=Dca33160.1.exon11;Parent=Dca33160.1
scaffold338	Augustus	exon	74421	74537	.	+	.	ID=Dca33160.1.exon12;Parent=Dca33160.1