Dca33180.1
Annotation
- 2-exons
- f-1
- sp|B9HUF8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822568#GO:0005634;GO:0043565;GO:0003700;GO:0008270;GO:0045893#3F1P1C
- sp|Q76DX9_TOBAC#AG-motif binding protein-5#Nicotiana tabacum (Common tobacco)#Name=AGP5#GO:0005634;GO:0043565;GO:0003700;GO:0008270;GO:0045893#3F1P1C
- Repeat List (scaffold3383)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33180.1 |
10 |
274 |
281 |
57.29 |
265 |
54 |
2e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HUF8_POPTR |
11 |
292 |
325 |
86.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33180.1 |
23 |
273 |
281 |
38.43 |
251 |
40 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G32890.1 |
20 |
261 |
308 |
78.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3383 |
Augustus |
mRNA |
22104 |
23687 |
. |
+ |
. |
ID=Dca33180.1;Parent=Dca33180 |
| scaffold3383 |
Augustus |
exon |
22104 |
22349 |
. |
+ |
. |
ID=Dca33180.1.exon1;Parent=Dca33180.1 |
| scaffold3383 |
Augustus |
exon |
23088 |
23687 |
. |
+ |
. |
ID=Dca33180.1.exon2;Parent=Dca33180.1 |
