Dca33185.1
Annotation
- 3-exons
- f-1
- sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- sp|O82276_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g31080#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold3384)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33185.1 |
614 |
997 |
1002 |
15.46 |
384 |
40 |
4e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH2_BETVU |
992 |
1376 |
1378 |
27.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33185.1 |
713 |
945 |
1002 |
7.78 |
233 |
33 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G42905.1 |
25 |
254 |
258 |
89.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3384 |
Augustus |
mRNA |
20288 |
26560 |
. |
+ |
. |
ID=Dca33185.1;Parent=Dca33185 |
| scaffold3384 |
Augustus |
exon |
20288 |
21324 |
. |
+ |
. |
ID=Dca33185.1.exon1;Parent=Dca33185.1 |
| scaffold3384 |
Augustus |
exon |
22583 |
23393 |
. |
+ |
. |
ID=Dca33185.1.exon2;Parent=Dca33185.1 |
| scaffold3384 |
Augustus |
exon |
25400 |
26560 |
. |
+ |
. |
ID=Dca33185.1.exon3;Parent=Dca33185.1 |
